ncRNA ID | novel_lus_miR238 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold221:303770-303927 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 135 - AAAAUAUACAAGACGGUCGGCACA - 158 |
Stem-loop(if miRNA) |
--A            C     G  CA                -           -    UAUAG   ACGGUUGUAUGCGU    AAAUAUACAAGA GGUCG CA  CCGACCGCCGUGCUUU GUCGUCGGCAU UAAC     AAA              A    |||||||||||| ||||| ||  |||||||||||||||| ||||||||||| ||||     |||    UUUAUGUGUUUU CCAGC GU  GGCUGGUGGCAUGGAA CGGCAGCCGUA GUUG     CUG              C UAA            A     G  AC                U           A    --CAA   UCAGCAGGUUUUGG |
Stem-loop sequence | AAAAUAUACAAGACGGUCGGCACACCGACCGCCGUGCUUUGUCGUCGGCAUUAACUAUAGAAAACGGUUGUAUGCGUACGGUUUUGGACGACUGUCAACGUUGAAUGCCGACGGCUAAGGUACGGUGGUCGGCAUGGCGACCAUUUUGUGUAUUUAAU |