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BaseInfo

ncRNA ID novel_lus_miR238
Species Linum usitatissimum
Class miRNA
Genome position scaffold221:303770-303927 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 135 - AAAAUAUACAAGACGGUCGGCACA - 158
Stem-loop(if miRNA) --A            C     G  CA                -           -    UAUAG   ACGGUUGUAUGCGU
   AAAUAUACAAGA GGUCG CA  CCGACCGCCGUGCUUU GUCGUCGGCAU UAAC     AAA              A
   |||||||||||| ||||| ||  |||||||||||||||| ||||||||||| ||||     |||
   UUUAUGUGUUUU CCAGC GU  GGCUGGUGGCAUGGAA CGGCAGCCGUA GUUG     CUG              C
UAA            A     G  AC                U           A    --CAA   UCAGCAGGUUUUGG
Stem-loop sequence AAAAUAUACAAGACGGUCGGCACACCGACCGCCGUGCUUUGUCGUCGGCAUUAACUAUAGAAAACGGUUGUAUGCGUACGGUUUUGGACGACUGUCAACGUUGAAUGCCGACGGCUAAGGUACGGUGGUCGGCAUGGCGACCAUUUUGUGUAUUUAAU