ncRNA ID | novel_lus_miR237 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2022:319125-319317 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 170 - AAUAAUUCGAGUUGUUGGGAGAGG - 193 |
Stem-loop(if miRNA) |
CA  -                   A   AGAG     -- AU AGUUUUUGCACAGGUCCACCUGCAUAUGAAAUUGUUGUAUUGAGGGCUGACAGGA   UC CUCAAUAACUCGAGUUGUU GGA    UUAAU  A  U                                                       U   || ||||||||||||||||||| |||    |||||  |  |                                                       U   AG GGGUUGUUGAGCUUAAUAA CCU    UUGGC  G  A                                                       C GG  A                   C   -ACG     AA -- AGUAUAUCAUAGCUAGGGGAGAGUGACAAGUUAAACUGACUCCCUAGAACCCUAG |
Stem-loop sequence | CAUCCUCAAUAACUCGAGUUGUUAGGAAGAGUUAAUAAUUAGUUUUUGCACAGGUCCACCUGCAUAUGAAAUUGUUGUAUUGAGGGCUGACAGGAUUCGAUCCCAAGAUCCCUCAGUCAAAUUGAACAGUGAGAGGGGAUCGAUACUAUAUGAAGAACGGUUGCAUCCCAAUAAUUCGAGUUGUUGGGAGAGG |