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BaseInfo

ncRNA ID novel_lus_miR227
Species Linum usitatissimum
Class miRNA
Genome position scaffold1525:1122-1289 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 145 - UAGACGUGUAUGUUGGGAAUGGCU - 168
Stem-loop(if miRNA) --  C      -          AUC        G       AA    GA       A         -G  UC     CAUAC  UA
  CU UUUCUA CGUGCAUGUC   UAUUAGCU AUUUGAA  UUUU  AAUUUUC UUUCAAAAU  GU  AUUUC     GU  A
  || |||||| ||||||||||   |||||||| |||||||  ||||  ||||||| |||||||||  ||  |||||     ||
  GG AAGGGU GUAUGUGCAG   AUAAUCGG UAAAUUU  AAAA  UUAAAAG GGAGUUUUA  CA  UAGAG     CA  C
UC  U      U          AUU        G       -A    AG       G         AA  GA     -CUUU  CC
Stem-loop sequence CUCUUUCUACGUGCAUGUCAUCUAUUAGCUGAUUUGAAAAUUUUGAAAUUUUCAUUUCAAAAUGGUUCAUUUCCAUACGUUAACCCACUUUCGAGAUAGACAAAUUUUGAGGGGAAAAUUGAAAAAAUUUAAAUGGGCUAAUAUUAGACGUGUAUGUUGGGAAUGGCU