ncRNA ID | novel_lus_miR227 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1525:1122-1289 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 145 - UAGACGUGUAUGUUGGGAAUGGCU - 168 |
Stem-loop(if miRNA) |
--  C      -          AUC        G       AA    GA       A         -G  UC     CAUAC  UA   CU UUUCUA CGUGCAUGUC   UAUUAGCU AUUUGAA  UUUU  AAUUUUC UUUCAAAAU  GU  AUUUC     GU  A   || |||||| ||||||||||   |||||||| |||||||  ||||  ||||||| |||||||||  ||  |||||     ||   GG AAGGGU GUAUGUGCAG   AUAAUCGG UAAAUUU  AAAA  UUAAAAG GGAGUUUUA  CA  UAGAG     CA  C UC  U      U          AUU        G       -A    AG       G         AA  GA     -CUUU  CC |
Stem-loop sequence | CUCUUUCUACGUGCAUGUCAUCUAUUAGCUGAUUUGAAAAUUUUGAAAUUUUCAUUUCAAAAUGGUUCAUUUCCAUACGUUAACCCACUUUCGAGAUAGACAAAUUUUGAGGGGAAAAUUGAAAAAAUUUAAAUGGGCUAAUAUUAGACGUGUAUGUUGGGAAUGGCU |