ncRNA ID | novel_lus_miR223 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1475:82-288 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUCACGUGUAUGUUGGGAAUCA - 24 |
Stem-loop(if miRNA) |
--    C           GG    CA A       AUC  G   CC   AAA      -C      AA C   A   UGUACA   A        ACA G    A   AUUU ACGUGUAUGUU  GAAU  C AAAAAUU   GU UCA  GUG   GCCCUU  AAAUAA  G CAA UGA      AAA UGAUUUUA   C CAAU A   |||| |||||||||||  ||||  | |||||||   || |||  |||   ||||||  ||||||  | ||| |||      ||| ||||||||   | ||||   UAAA UGCAUGUACAA  UUUA  G UUUUUAA   CA AGU  UAC   UGGGGA  UUUAUU  C GUU ACU      UUU AUUAAAAU   G GUUA U UA    C           GA    CC A       AUC  A   AA   CAC      CA      AC A   A   UUACUA   A        -GA -    A |
Stem-loop sequence | AUUUCACGUGUAUGUUGGGAAUCACAAAAAAUUAUCGUGUCACCGUGAAAGCCCUUCAAAUAAAAGCCAAAUGAUGUACAAAAAUGAUUUUAACACGCAAUAAUAAUUGGAGUAAAAUUAAUUUAUCAUUUCAAUUGACCAUUAUUUACAGGGGUCACCAUAAUGAAACCUAAAUUUUUAGCCAUUUAGAACAUGUACGUCAAAUAU |