ncRNA ID | novel_lus_miR219 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1264:79-280 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GACAUGCAUGUUGGAAAUGGCUU - 23 |
Stem-loop(if miRNA) |
--   A           A      U    GACAUGU        CG   CC   A A              ---GUA   ---    AUCAAUUUUAGACGAUA   GAC UGCAUGUUGGA AUGGCU AAAA       UUUAUCAU  UAA  CCU U AAUAAUGGUCAAAU      UUU   AAAA                 U   ||| ||||||||||| |||||| ||||       ||||||||  |||  ||| | ||||||||||||||      |||   ||||   CUG AUGUACAACCU UACUGA UUUU       AAGUGGUA  AUU  GGA G UUAUUAUCGGUUUA      GUU   AUAA                 U GA   C           A      U    AACUCCC        CA   CU   A C              GUUCAA   UAU    AGUAUUGUGCGAUUUUG |
Stem-loop sequence | GACAUGCAUGUUGGAAAUGGCUUAAAAGACAUGUUUUAUCAUCGUAACCCCUAUAAAUAAUGGUCAAAUGUAUUUAAAAAUCAAUUUUAGACGAUAUUGUUUUAGCGUGUUAUGAAAUAUAUUUGAACUUGAUUUGGCUAUUAUUCGAAGGUCUUAACAUGGUGAACCCUCAAUUUUUAGUCAUAUCCAACAUGUACGUCAG |