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BaseInfo

ncRNA ID novel_lus_miR219
Species Linum usitatissimum
Class miRNA
Genome position scaffold1264:79-280 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 23
Mature sequence(if miRNA) 1 - GACAUGCAUGUUGGAAAUGGCUU - 23
Stem-loop(if miRNA) --   A           A      U    GACAUGU        CG   CC   A A              ---GUA   ---    AUCAAUUUUAGACGAUA
  GAC UGCAUGUUGGA AUGGCU AAAA       UUUAUCAU  UAA  CCU U AAUAAUGGUCAAAU      UUU   AAAA                 U
  ||| ||||||||||| |||||| ||||       ||||||||  |||  ||| | ||||||||||||||      |||   ||||
  CUG AUGUACAACCU UACUGA UUUU       AAGUGGUA  AUU  GGA G UUAUUAUCGGUUUA      GUU   AUAA                 U
GA   C           A      U    AACUCCC        CA   CU   A C              GUUCAA   UAU    AGUAUUGUGCGAUUUUG
Stem-loop sequence GACAUGCAUGUUGGAAAUGGCUUAAAAGACAUGUUUUAUCAUCGUAACCCCUAUAAAUAAUGGUCAAAUGUAUUUAAAAAUCAAUUUUAGACGAUAUUGUUUUAGCGUGUUAUGAAAUAUAUUUGAACUUGAUUUGGCUAUUAUUCGAAGGUCUUAACAUGGUGAACCCUCAAUUUUUAGUCAUAUCCAACAUGUACGUCAG