ncRNA ID | novel_lus_miR217 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold981:75509-75693 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 162 - AUGUUGGAAAUGGCUAAAAAAUAA - 185 |
Stem-loop(if miRNA) |
--AA       A    C                        CA            -UC      CC   C       C      C  A   GG     UUUUUAG CAUU CCAAUAUGCAUGUCAAAUAUUAGC  AUUUGAAAAUUU   AAUUUU  UGU AAAAUGA CAAUUU UA AGG  U     ||||||| |||| ||||||||||||||||||||||||  ||||||||||||   ||||||  ||| ||||||| |||||| || |||     AAAAAUC GUAA GGUUGUAUGUACAGUUUAUAAUUG  UAAACUUUUAAA   UUAAAA  AUA UUUUACU GUUAAA GU UCC  U AAUA       G    A                        AC            CUU      UA   U       A      A  A   AA |
Stem-loop sequence | AAUUUUUAGACAUUCCCAAUAUGCAUGUCAAAUAUUAGCCAAUUUGAAAAUUUUCAAUUUUCCUGUCAAAAUGACCAAUUUCUAAAGGGGUUAACCUAUGAAAAUUGAUCAUUUUUAUAAUAAAAUUUUCAAAUUUUCAAAUCAGUUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAAAAAAUAA |