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BaseInfo

ncRNA ID novel_lus_miR217
Species Linum usitatissimum
Class miRNA
Genome position scaffold981:75509-75693 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996371
Length 24
Mature sequence(if miRNA) 162 - AUGUUGGAAAUGGCUAAAAAAUAA - 185
Stem-loop(if miRNA) --AA       A    C                        CA            -UC      CC   C       C      C  A   GG
    UUUUUAG CAUU CCAAUAUGCAUGUCAAAUAUUAGC  AUUUGAAAAUUU   AAUUUU  UGU AAAAUGA CAAUUU UA AGG  U
    ||||||| |||| ||||||||||||||||||||||||  ||||||||||||   ||||||  ||| ||||||| |||||| || |||
    AAAAAUC GUAA GGUUGUAUGUACAGUUUAUAAUUG  UAAACUUUUAAA   UUAAAA  AUA UUUUACU GUUAAA GU UCC  U
AAUA       G    A                        AC            CUU      UA   U       A      A  A   AA
Stem-loop sequence AAUUUUUAGACAUUCCCAAUAUGCAUGUCAAAUAUUAGCCAAUUUGAAAAUUUUCAAUUUUCCUGUCAAAAUGACCAAUUUCUAAAGGGGUUAACCUAUGAAAAUUGAUCAUUUUUAUAAUAAAAUUUUCAAAUUUUCAAAUCAGUUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAAAAAAUAA