ncRNA ID | novel_lus_miR214 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold687:368502-368662 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 138 - AUUUGAUAUGCAUGUUGGAAAUGA - 161 |
Stem-loop(if miRNA) |
--AUUC                    AU     A     C       -----CAGCA   C     U      U  -     UGU       CCAACAUGCAUGUCAAAUAU  UAGCC GUUUG AAAUUUU          UGU AAAAU GGUCAA UU UCGUA   U       ||||||||||||||||||||  ||||| ||||| |||||||          ||| ||||| |||||| || |||||       GGUUGUACGUAUAGUUUAUA  AUCGG UAAAC UUUAAAA          ACG UUUUA CCAGUU AA AGUAU   A AGUAAA                    --     C     U       CUUUAAAAUA   C     -      U  C     UAU |
Stem-loop sequence | AUUCCCAACAUGCAUGUCAAAUAUAUUAGCCAGUUUGCAAAUUUUCAGCAUGUCAAAAUUGGUCAAUUUUCGUAUGUUAUAUUAUGACAAUUUGACCAUUUUCGCAAUAAAAUUUCAAAAUUUUCAAAUCGGCUAAUAUUUGAUAUGCAUGUUGGAAAUGA |