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BaseInfo

ncRNA ID novel_lus_miR214
Species Linum usitatissimum
Class miRNA
Genome position scaffold687:368502-368662 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 138 - AUUUGAUAUGCAUGUUGGAAAUGA - 161
Stem-loop(if miRNA) --AUUC                    AU     A     C       -----CAGCA   C     U      U  -     UGU
      CCAACAUGCAUGUCAAAUAU  UAGCC GUUUG AAAUUUU          UGU AAAAU GGUCAA UU UCGUA   U
      ||||||||||||||||||||  ||||| ||||| |||||||          ||| ||||| |||||| || |||||
      GGUUGUACGUAUAGUUUAUA  AUCGG UAAAC UUUAAAA          ACG UUUUA CCAGUU AA AGUAU   A
AGUAAA                    --     C     U       CUUUAAAAUA   C     -      U  C     UAU
Stem-loop sequence AUUCCCAACAUGCAUGUCAAAUAUAUUAGCCAGUUUGCAAAUUUUCAGCAUGUCAAAAUUGGUCAAUUUUCGUAUGUUAUAUUAUGACAAUUUGACCAUUUUCGCAAUAAAAUUUCAAAAUUUUCAAAUCGGCUAAUAUUUGAUAUGCAUGUUGGAAAUGA