ncRNA ID | novel_lus_miR213 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold687:294818-294996 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996371;ERR1611436;ERR1611439;ERR1611442;ERR906803 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUGGAUUGAAGGGAGCUCU - 20 |
Stem-loop(if miRNA) |
--         G        CA     ------U UG       UGA      A   G     C    G -----UU             -CG   C   AGCUCCUUU GGUCCAAA  GAGGG       G  GAUAGGG   AACGGA GCU CUGAG UAUG A       CCACAGCCACCCC   UAU U   ||||||||| ||||||||  |||||       |  |||||||   |||||| ||| ||||| |||| |       |||||||||||||   ||| U   UCGAGGGAA UUAGGUUU  CUCCC       C  UUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGUGGGG   AUA A UC         G        -C     UUCUUUU UU       ---      C   G     U    G UUUGCUC             UUA   A |
Stem-loop sequence | AGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAAACGGAAGCUGCUGAGCUAUGGAUUCCACAGCCACCCCCGUAUCUUAAAUAAUUGGGGUGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUUUCUUCCCUCCUUUGGAUUGAAGGGAGCUCU |