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BaseInfo

ncRNA ID novel_lus_miR213
Species Linum usitatissimum
Class miRNA
Genome position scaffold687:294818-294996 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371;ERR1611436;ERR1611439;ERR1611442;ERR906803
Length 20
Mature sequence(if miRNA) 1 - UUUGGAUUGAAGGGAGCUCU - 20
Stem-loop(if miRNA) --         G        CA     ------U UG       UGA      A   G     C    G -----UU             -CG   C
  AGCUCCUUU GGUCCAAA  GAGGG       G  GAUAGGG   AACGGA GCU CUGAG UAUG A       CCACAGCCACCCC   UAU U
  ||||||||| ||||||||  |||||       |  |||||||   |||||| ||| ||||| |||| |       |||||||||||||   ||| U
  UCGAGGGAA UUAGGUUU  CUCCC       C  UUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGUGGGG   AUA A
UC         G        -C     UUCUUUU UU       ---      C   G     U    G UUUGCUC             UUA   A
Stem-loop sequence AGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAAACGGAAGCUGCUGAGCUAUGGAUUCCACAGCCACCCCCGUAUCUUAAAUAAUUGGGGUGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUUUCUUCCCUCCUUUGGAUUGAAGGGAGCUCU