ncRNA ID | novel_lus_miR203 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold61:75754-75976 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996372;ERR1611435;ERR1611435;ERR1611435;ERR1611436;ERR1611436;ERR1611433;ERR1611433;ERR1611437;ERR1611437;ERR1611437;ERR1611433;ERR1611433;ERR1611438;ERR1611438;ERR1611439;ERR1611440;ERR1611442;ERR1611442;ERR1611443;ERR1611443;ERR1611443;ERR1611444;ERR1611444;ERR906803;ERR906804;ERR1611434;SRR2996369;SRR2996369 |
Length | 22 |
Mature sequence(if miRNA) | 202 - UCUUUCCGAUGCCUUCCAUUCC - 223 |
Stem-loop(if miRNA) |
--     U    -            UA  A   ---U  G      A  C         C   U    U       AG   U          CAAUAA    --AUUG   U    GA   AAUGG GGGC UCGGAAAGAAAA  AA GAA    CA UGAUUU UU GUUUUCUUU CGA GCCU CCAUUCC  UGA UUCCAUCCAU      GCCU      CAU AGUC  G   ||||| |||| ||||||||||||  || |||    || |||||| || ||||||||| ||| |||| |||||||  ||| ||||||||||      ||||      ||| ||||  A   UUACC UCCG AGCCUUUCUUUU  UU CUU    GU ACUAAG AA CAAAAGAAA GUU CGGG GGUAAGG  GCU AGGGUGGGUA      CGGA      GUA UCGG  A CC     U    U            GC  A   UGUU  G      A  A         C   -    U       CG   U          ------    GCUAGA   -    GA |
Stem-loop sequence | AAUGGUGGGCUCGGAAAGAAAAUAAAAGAAUCAGUGAUUUAUUCGUUUUCUUUCCGAUGCCUUCCAUUCCAGUGAUUUCCAUCCAUCAAUAAGCCUAUUGCAUUAGUCGAGAAAGGGCUAUGAGAUCGAGGCAUGGGUGGGAUUCGGCGGAAUGGUGGGCUUGCAAAGAAAACAAAAGAAUCAGUGUUGUUUCAUUCGUUUUCUUUCCGAUGCCUUCCAUUCC |