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BaseInfo

ncRNA ID	ath-miR2936
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr4:1046804-1046983 [-]
Reference genome	TAIR10
Source	miRBase
Length	22
Mature sequence(if miRNA)	145 - CUUGAGAGAGAGAACACAGACG - 166
Stem-loop(if miRNA)	--------AGC       -       C      GAUACCAA   ---U    AAUC            -----UAUAAU     CAU CCAUUUUCGAA           CUUGAGA GAGAGAA ACAGAC        CUU    CUUC    UCGUUGCCGCAG           UAUCU   U |||||||||||           ||||||| ||||||| ||||||        |||    ||||    ||||||||||||           ||||| GGUAAAAGCUU           GAACUUU CUCUCUU UGUCUG        GAA    GAAG    AGCGGCGGCGUC           AUAGG   C            CAUUCACCAAA       U       U      AAAAAUAA   CAUC    -AAC            UUCCUCUCUAU     CUC
Stem-loop sequence	CCAUUUUCGAAAGCCUUGAGAGAGAGAACACAGACGAUACCAACUUUCUUCAAUCUCGUUGCCGCAGUAUAAUUAUCUCAUUCCUCGGAUAUAUCUCUCCUUCUGCGGCGGCGACAAGAAGCUACAAGAAUAAAAAGUCUGUUUUCUCUCUUUUCAAGAAACCACUUACUUCGAAAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_115137.4	ncRNA:22   GCAGACACAAGAGAGAGAGUUC   1   |||||*|*|||||||||||||* targets:349   CGUCUCUCUUCUCUCUCUCAAU   370 Target Full Sequence	3.0	Arabidopsis thaliana binding protein (ZPR3), mRNA	binding protein(ZPR3)	coding protein	psRNATarget
AY065450.1	ncRNA:22   GCAGACACAAGAGAGAGAGUUC   1   |||||*|*|||||||||||||* targets:33   CGUCUCUCUUCUCUCUCUCAAU   54 Target Full Sequence	3.0	Arabidopsis thaliana unknown protein (At3g52770) mRNA, complete cds	NA	coding protein	psRNATarget

Reference

1	PMID:20042113 "MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana"; Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H; BMC Genomics. 10:643(2009).