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BaseInfo

ncRNA ID novel_lus_miR182
Species Linum usitatissimum
Class miRNA
Genome position scaffold461:2905-3108 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 23
Mature sequence(if miRNA) 1 - UGACGUGUAAGUUGGCAAUGGCU - 23
Stem-loop(if miRNA) --         A     C       A    UUG        C    -UUAA     UC       A  UAC     --G      A     UC   ACAUCAUG
  UGACGUGUA GUUGG AAUGGCU AAAA   AGGUUUCA CAUG     GCCCU  AAAUAAU GG   AUGAA   UUAGAU AUAUU  UUC        A
  ||||||||| ||||| ||||||| ||||   |||||||| ||||     |||||  ||||||| ||   |||||   |||||| |||||  |||
  ACUGUACGU CAACC UUAUUGA UUUU   UUCAAAGU GUAU     UGGGA  UUUAUUA CC   UACUU   AAUUUA UAUAA  GAG        A
AA         A     U       A    CGA        A    UACUG     -U       A  UAA     AAA      G     UU   CUAUAACA
Stem-loop sequence UGACGUGUAAGUUGGCAAUGGCUAAAAAUUGAGGUUUCACCAUGUUAAGCCCUUCAAAUAAUAGGUACAUGAAGUUAGAUAAUAUUUCUUCACAUCAUGAAACAAUAUCGAGUUAAUAUGAUUUAAAAAUUCAUAAUCCAAUUAUUUUAGGGUGUCAUUAUGAUGAAACUUAGCUUUUAAGUUAUUUCCAACAUGCAUGUCAAA