ncRNA ID | novel_lus_miR182 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold461:2905-3108 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UGACGUGUAAGUUGGCAAUGGCU - 23 |
Stem-loop(if miRNA) |
--         A     C       A    UUG        C    -UUAA     UC       A  UAC     --G      A     UC   ACAUCAUG   UGACGUGUA GUUGG AAUGGCU AAAA   AGGUUUCA CAUG     GCCCU  AAAUAAU GG   AUGAA   UUAGAU AUAUU  UUC        A   ||||||||| ||||| ||||||| ||||   |||||||| ||||     |||||  ||||||| ||   |||||   |||||| |||||  |||   ACUGUACGU CAACC UUAUUGA UUUU   UUCAAAGU GUAU     UGGGA  UUUAUUA CC   UACUU   AAUUUA UAUAA  GAG        A AA         A     U       A    CGA        A    UACUG     -U       A  UAA     AAA      G     UU   CUAUAACA |
Stem-loop sequence | UGACGUGUAAGUUGGCAAUGGCUAAAAAUUGAGGUUUCACCAUGUUAAGCCCUUCAAAUAAUAGGUACAUGAAGUUAGAUAAUAUUUCUUCACAUCAUGAAACAAUAUCGAGUUAAUAUGAUUUAAAAAUUCAUAAUCCAAUUAUUUUAGGGUGUCAUUAUGAUGAAACUUAGCUUUUAAGUUAUUUCCAACAUGCAUGUCAAA |