ncRNA ID | novel_lus_miR180 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold4502:249-387 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 116 - AUUAGGUAUCGGAAGGCCUCGGCC - 139 |
Stem-loop(if miRNA) |
--   - C        A      GUA       -   UC    C     C              A   CCU   CCG G CCUUCCGA AUUUAG   UCGGAAG ACC  GGCC UUCCG AAUUUAGGUUUCGG AGG   C   ||| | |||||||| ||||||   ||||||| |||  |||| ||||| |||||||||||||| |||   GGC C GGAAGGCU UGGAUU   AGCCUUC UGG  CCGG AAGGC UUGGAUUUAAAGCC UCC   G CC   U C        A      AAA       A   CU    -     U              C   CUA |
Stem-loop sequence | CCGGCCCUUCCGAAAUUUAGGUAUCGGAAGACCUCGGCCCUUCCGCAAUUUAGGUUUCGGAAGGCCUCGAUCCCUCCCGAAAUUUAGGUUUCGGAAGGCCUCGGUACUUCCGAAAAUUAGGUAUCGGAAGGCCUCGGCC |