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BaseInfo

ncRNA ID novel_lus_miR180
Species Linum usitatissimum
Class miRNA
Genome position scaffold4502:249-387 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996372
Length 24
Mature sequence(if miRNA) 116 - AUUAGGUAUCGGAAGGCCUCGGCC - 139
Stem-loop(if miRNA) --   - C        A      GUA       -   UC    C     C              A   CCU
  CCG G CCUUCCGA AUUUAG   UCGGAAG ACC  GGCC UUCCG AAUUUAGGUUUCGG AGG   C
  ||| | |||||||| ||||||   ||||||| |||  |||| ||||| |||||||||||||| |||
  GGC C GGAAGGCU UGGAUU   AGCCUUC UGG  CCGG AAGGC UUGGAUUUAAAGCC UCC   G
CC   U C        A      AAA       A   CU    -     U              C   CUA
Stem-loop sequence CCGGCCCUUCCGAAAUUUAGGUAUCGGAAGACCUCGGCCCUUCCGCAAUUUAGGUUUCGGAAGGCCUCGAUCCCUCCCGAAAUUUAGGUUUCGGAAGGCCUCGGUACUUCCGAAAAUUAGGUAUCGGAAGGCCUCGGCC