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BaseInfo

ncRNA ID novel_lus_miR149
Species Linum usitatissimum
Class miRNA
Genome position scaffold3345:18414-18614 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - AUUUGACAUGGAUGUUGGAAAUGA - 24
Stem-loop(if miRNA) --          G            AU      -UUAA    U -----  UAUAUUAAAUCCUUCAAAUAAUAGAGACAUGAAGUUACAUUUUUCAACAUGCU
  AUUUGACAUG AUGUUGGAAAUG  UAAAAA     GGUU G     AC                                                     A
  |||||||||| ||||||||||||  ||||||     |||| |     ||
  UAAACUGUAC UACAACCUUUAC  AUUUUU     CACA G     CC                                                     A
UA          G            CG      UAGUU    - UAAUA  AUUGGGGCAUUUGUGACCGAUUUGCUUCAAUUUUUAGUUUAAAUGAGCAAUAA
Stem-loop sequence AUUUGACAUGGAUGUUGGAAAUGAUUAAAAAUUAAGGUUUGACUAUAUUAAAUCCUUCAAAUAAUAGAGACAUGAAGUUACAUUUUUCAACAUGCUAAAAUAACGAGUAAAUUUGAUUUUUAACUUCGUUUAGCCAGUGUUUACGGGGUUACCAUAAUGACACUUGAUUUUUUAGCCAUUUCCAACAUGCAUGUCAAAUAU