ncRNA ID | novel_lus_miR149 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold3345:18414-18614 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUGACAUGGAUGUUGGAAAUGA - 24 |
Stem-loop(if miRNA) |
--          G            AU      -UUAA    U -----  UAUAUUAAAUCCUUCAAAUAAUAGAGACAUGAAGUUACAUUUUUCAACAUGCU   AUUUGACAUG AUGUUGGAAAUG  UAAAAA     GGUU G     AC                                                     A   |||||||||| ||||||||||||  ||||||     |||| |     ||   UAAACUGUAC UACAACCUUUAC  AUUUUU     CACA G     CC                                                     A UA          G            CG      UAGUU    - UAAUA  AUUGGGGCAUUUGUGACCGAUUUGCUUCAAUUUUUAGUUUAAAUGAGCAAUAA |
Stem-loop sequence | AUUUGACAUGGAUGUUGGAAAUGAUUAAAAAUUAAGGUUUGACUAUAUUAAAUCCUUCAAAUAAUAGAGACAUGAAGUUACAUUUUUCAACAUGCUAAAAUAACGAGUAAAUUUGAUUUUUAACUUCGUUUAGCCAGUGUUUACGGGGUUACCAUAAUGACACUUGAUUUUUUAGCCAUUUCCAACAUGCAUGUCAAAUAU |