ncRNA ID | novel_lus_miR147 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold123:281499-281677 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611434;SRR2996371;ERR1611436;ERR1611433;ERR1611439;ERR906803 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUGGAUUGAAGGGAGCUCU - 20 |
Stem-loop(if miRNA) |
--         G        CA     ---U ---U        UGA      A   G     C    G -----UU         C   CUU UG    AGCUCCUUU GGUCCAAA  GAGGG    G    GGAUAGGG   GAUGGA GCU CUGAG UAUG A       CCACAACCC ACC   U  AU   ||||||||| ||||||||  |||||    |    ||||||||   |||||| ||| ||||| |||| |       ||||||||| |||   |  |U   UCGAGGGAA UUAGGUUU  CUCCC    C    UUUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGG UGG   A  UA UC         G        -C     UUCU UUCU        ---      C   G     U    G UUUGCUC         -   CCU GU  |
Stem-loop sequence | AGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAGAUGGAAGCUGCUGAGCUAUGGAUUCCACAACCCCACCCUUUUGAUUAUUGAUCCGGUGGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUCUCUUCCCUCCUUUGGAUUGAAGGGAGCUCU |