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BaseInfo

ncRNA ID novel_lus_miR147
Species Linum usitatissimum
Class miRNA
Genome position scaffold123:281499-281677 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611434;SRR2996371;ERR1611436;ERR1611433;ERR1611439;ERR906803
Length 20
Mature sequence(if miRNA) 1 - UUUGGAUUGAAGGGAGCUCU - 20
Stem-loop(if miRNA) --         G        CA     ---U ---U        UGA      A   G     C    G -----UU         C   CUU UG 
  AGCUCCUUU GGUCCAAA  GAGGG    G    GGAUAGGG   GAUGGA GCU CUGAG UAUG A       CCACAACCC ACC   U  AU
  ||||||||| ||||||||  |||||    |    ||||||||   |||||| ||| ||||| |||| |       ||||||||| |||   |  |U
  UCGAGGGAA UUAGGUUU  CUCCC    C    UUUGUCCC   UUGCCU CGA GACUC AUAC U       GGUGUUGGG UGG   A  UA
UC         G        -C     UUCU UUCU        ---      C   G     U    G UUUGCUC         -   CCU GU 
Stem-loop sequence AGCUCCUUUGGGUCCAAACAGAGGGUGUGGAUAGGGUGAGAUGGAAGCUGCUGAGCUAUGGAUUCCACAACCCCACCCUUUUGAUUAUUGAUCCGGUGGGUUGUGGCUCGUUUUGCAUAUCUCAGGAGCCUCCGUUCCCUGUUUUCUUCUCUUCCCUCCUUUGGAUUGAAGGGAGCUCU