ncRNA ID | novel_lus_miR146 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold3299:211-444 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUGGGCUAAUAUUUGACAUGUA - 24 |
Stem-loop(if miRNA) |
--    G                                      - UG     U  C  U   A G  G        AUUUCCAA           -UAAU    CUUAACAU   AA   AAAU GGCUAAUAUUUGACAUGUAUGUUGGGAAUGGCUAAAAA U  AGGUU CA CA GGU A CC UUCAAAUA        AUGAAUUUAGA     AUUU        UGU  C   |||| |||||||||||||||||||||||||||||||||||||| |  ||||| || || ||| | || ||||||||        |||||||||||     ||||        |||   UUUA CCGAUUAUAAACUGUACGUACAACCUUUAUCGAUUUUU A  UCCAA GU GU UCA U GG GAGUUUAU        UAUUUAAAUUU     UAAA        AUA  A AG    G                                      C GU     -  A  C   C G  G        GAACCUAA           UUAAU    -AUCAGCU   AA |
Stem-loop sequence | AAAUGGGCUAAUAUUUGACAUGUAUGUUGGGAAUGGCUAAAAAUUGAGGUUUCACCAUGGUAAGCCGUUCAAAUAAUUUCCAAAUGAAUUUAGAUAAUAUUUCUUAACAUUGUAACAAAAUAUCGACUAAAAUUAAUUUUUAAAUUUAUAAUCCAAGUAUUUGAGGGGGUCACUCUGAUGAACCUUGACUUUUUAGCUAUUUCCAACAUGCAUGUCAAAUAUUAGCCGAUUUGA |