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BaseInfo

ncRNA ID novel_lus_miR143
Species Linum usitatissimum
Class miRNA
Genome position scaffold319:964163-964302 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 21
Mature sequence(if miRNA) 1 - UUGGCUAAUAUUUUACGUGCA - 21
Stem-loop(if miRNA) --           A  AU      -   U    UU         CA  U         AUAUCCA     G
  CAUGUAAAAUA UA  CAAUUU AAA UUUU  AAUUUUCAU  CA AAUUGGUCA       AUGGG U
  ||||||||||| ||  |||||| ||| ||||  |||||||||  || |||||||||       ||||| U
  GUGCAUUUUAU AU  GUUAAA UUU AAAA  UUAAAAGUA  GU UUAACCAGU       UAUCC A
AC           A  CG      C   U    CU         CA  U         --AAAUG     A
Stem-loop sequence CAUGUAAAAUAAUAAUCAAUUUAAAUUUUUUUAAUUUUCAUCACAUAAUUGGUCAAUAUCCAAUGGGGUUAACCUAUGUAAAUGACCAAUUUUGACAUGAAAAUUUCAAAAUUUUCAAAUUGGCUAAUAUUUUACGUGCA