ncRNA ID | novel_lus_miR142 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold31:23745-23947 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUGACAUGUAUGUUGGGAAUGA - 24 |
Stem-loop(if miRNA) |
--    G            GG      -C         UAU  CGC      -AA   -  UCAAAUA  A   U         A   AAAU         AACAUUA   AUUU ACAUGUAUGUUG  AAUGAC  AAAAAUCGA   GU   CAUUAU   GCC CU       AU GUC AAUGAAGUU AAA    AUUUUGUUC       A   |||| ||||||||||||  ||||||  |||||||||   ||   ||||||   ||| ||       || ||| ||||||||| |||    |||||||||       U   UAAA UGUACGUACAAC  UUACUG  UUUUUAGUU   CA   GUAAUA   UGG GA       UA CAG UUAUUUCAA UUU    UAAAACGAG       A UA    G            UU      AU         ---  -AA      CCA   A  -------  C   U         C   GAGU         CCACAAU |
Stem-loop sequence | AUUUGACAUGUAUGUUGGGAAUGACCAAAAAUCGAUAUGUCGCCAUUAUAAGCCCUUCAAAUAAUAGUCUAAUGAAGUUAAAAAAAUAUUUUGUUCAACAUUAAUAUAACACCGAGCAAAAUUGAGUUUCAACUUUAUUUGACCAUAGAGGUACCAUAAUGAAACUUGAUUUUUUAGUCAUUUUCAACAUGCAUGUGAAAUAU |