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BaseInfo

ncRNA ID novel_lus_miR141
Species Linum usitatissimum
Class miRNA
Genome position scaffold31:1826582-1826751 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - GACAUGCAUGUUGGUAAUGGCUAA - 24
Stem-loop(if miRNA) --       U       U       A        C     GAC  UU  GA       --UCU      U   A       U   CU
  AGCCAUU UCAACAU CAUGUCA AUAUUAAU AAUUU   AA  UU  AAUUUUU     UGAAAU GUC AUUUCCA AGG  A
  ||||||| ||||||| ||||||| |||||||| |||||   ||  ||  |||||||     |||||| ||| ||||||| |||
  UCGGUAA GGUUGUA GUACAGU UGUAAUUA UUAAA   UU  AA  UUAAAAG     AUUUUA CAG UAAAGGU UCC  A
AA       U       C       C        A     AUU  UU  -A       UACAU      -   A       U   CC
Stem-loop sequence AGCCAUUUUCAACAUUCAUGUCAAAUAUUAAUCAAUUUGACAAUUUUGAAAUUUUUUCUUGAAAUUGUCAAUUUCCAUAGGCUAACCCCUUUGGAAAUAGACAUUUUAUACAUGAAAAUUAAAUUUUUUAAAAUUAAUUAAUGUCUGACAUGCAUGUUGGUAAUGGCUAA