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BaseInfo

ncRNA ID novel_lus_miR136
Species Linum usitatissimum
Class miRNA
Genome position scaffold3081:303-470 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 23
Mature sequence(if miRNA) 146 - UGACGUGUAUGUUGGGAAUGGUU - 168
Stem-loop(if miRNA) --                   A   U    G   -A           AGAA      -  G  C    --G C  -       UC  UU
  CCAUUUCCAACAUGCAUGU AGA AUUA CCG  UUGGAAAAUUU    AGUUUU AU UC AAAU   G UC AUUUCCA  GG  A
  ||||||||||||||||||| ||| |||| |||  |||||||||||    |||||| || || ||||   | || |||||||  ||
  GGUAAGGGUUGUAUGUGCA UUU UAAU GGU  AAUUUUUUAAA    UUAAAA UG AG UUUG   C AG UAAAGGU  CC  A
UU                   G   U    A   AG           ---G      C  G  -    AAA -  C       UU  CC
Stem-loop sequence CCAUUUCCAACAUGCAUGUAAGAUAUUAGCCGAUUGGAAAAUUUAGAAAGUUUUAUGUCCAAAUGGCUCAUUUCCAUCGGUUAACCCCUUUGGAAAUCGACAAAGUUUGAGGUCAAAAUUGAAAUUUUUUAAGAUGGAUAAUUUUUGACGUGUAUGUUGGGAAUGGUU