ncRNA ID | novel_lus_miR136 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold3081:303-470 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 23 |
Mature sequence(if miRNA) | 146 - UGACGUGUAUGUUGGGAAUGGUU - 168 |
Stem-loop(if miRNA) |
--                   A   U    G   -A           AGAA      -  G  C    --G C  -       UC  UU   CCAUUUCCAACAUGCAUGU AGA AUUA CCG  UUGGAAAAUUU    AGUUUU AU UC AAAU   G UC AUUUCCA  GG  A   ||||||||||||||||||| ||| |||| |||  |||||||||||    |||||| || || ||||   | || |||||||  ||   GGUAAGGGUUGUAUGUGCA UUU UAAU GGU  AAUUUUUUAAA    UUAAAA UG AG UUUG   C AG UAAAGGU  CC  A UU                   G   U    A   AG           ---G      C  G  -    AAA -  C       UU  CC |
Stem-loop sequence | CCAUUUCCAACAUGCAUGUAAGAUAUUAGCCGAUUGGAAAAUUUAGAAAGUUUUAUGUCCAAAUGGCUCAUUUCCAUCGGUUAACCCCUUUGGAAAUCGACAAAGUUUGAGGUCAAAAUUGAAAUUUUUUAAGAUGGAUAAUUUUUGACGUGUAUGUUGGGAAUGGUU |