Search result

BaseInfo

ncRNA ID novel_lus_miR133
Species Linum usitatissimum
Class miRNA
Genome position scaffold30:87818-87902 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371;ERR1611435;SRR2996372;ERR1611436;ERR1611437;ERR1611438;ERR1611439;ERR1611440;ERR1611441;ERR1611443;ERR1611433;ERR1611444;ERR1611444;ERR1611434;ERR906802;ERR906803;ERR906804;SRR2996369
Length 22
Mature sequence(if miRNA) 1 - UUCAUUCCUCUUCCUAAAAUAG - 22
Stem-loop(if miRNA) --       C              -C  C     ---A    AAA
  UUCAUUC UCUUCCUAAAAUAG  UC CUUUC    CUGC   C
  ||||||| ||||||||||||||  || |||||    ||||
  AAGUAAG AGAAGGAUUUUAUC  AG GAAAG    GAUG   C
AC       -              UA  U     AAGA    AAA
Stem-loop sequence UUCAUUCCUCUUCCUAAAAUAGCUCCCUUUCACUGCAAACCAAAGUAGAGAAGAAAGUGAAUCUAUUUUAGGAAGAGAAUGAACA