Search result

BaseInfo

ncRNA ID novel_lus_miR123
Species Linum usitatissimum
Class miRNA
Genome position scaffold280:1801579-1801721 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371
Length 24
Mature sequence(if miRNA) 120 - AUCGGCUAAUAUUUGACAUGCAUA - 143
Stem-loop(if miRNA) --UA   A             UAUUUAAAAAAAAAUAAUUUU  UG      --  GGUCAAUUUUGGUGUGUUAUACUAUGA
    CAU UCAAAUAUUAGUC                     CA  UUAAAA  UU                           A
    ||| |||||||||||||                     ||  ||||||  ||
    GUA AGUUUAUAAUCGG                     AU  ACUUUU  AA                           A
AUAC   C             -------------------CU  --      UA  ACUUAAAAGAACACUUUAACAAGUUUA
Stem-loop sequence UACAUAUCAAAUAUUAGUCUAUUUAAAAAAAAAUAAUUUUCAUGUUAAAAUUGGUCAAUUUUGGUGUGUUAUACUAUGAAAAUUUGAACAAUUUCACAAGAAAAUUCAAAAUUUUUCAUAUCGGCUAAUAUUUGACAUGCAUA