ncRNA ID | novel_lus_miR118 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2720:401-601 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCGUGUAUGUUGGGAAUGGCUAA - 24 |
Stem-loop(if miRNA) |
--A              AAU         UUAAG      CCAAGUUA   - C UC       A A      G     UAAACUAUUUCUUG  A     AA    GCGUGUAUGUUGGG   GGCUAAAAA     GUUUCA        AGC C U  AAAUGAU G CAAAUG AGUUA              AC CGAUA  A    ||||||||||||||   |||||||||     ||||||        ||| | |  ||||||| | |||||| |||||              || |||||    UGUACGUGCAACUU   UCGAUUUUU     CAAAGU        UUG G A  UUUACUA C GUUUAC UUAAU              UG GCUAU  C AAC              -CC         CAGUA      -AUUACCA   A C UA       C A      -     -UUUUUUAUCAAAA  A     AA |
Stem-loop sequence | AGCGUGUAUGUUGGGAAUGGCUAAAAAUUAAGGUUUCACCAAGUUAAGCCCUUCAAAUGAUAGACAAAUGGAGUUAUAAACUAUUUCUUGACACGAUAAAACAAUAUCGAGUAAAACUAUUUUUUUAAUUCAUUUGACCAUCAUUUAUACGAGUUACCAUUAUGAAACAUGACUUUUUAGCUCCUUCAACGUGCAUGUCAA |