ncRNA ID | novel_lus_miR117 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold112:479075-479207 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 110 - CGGAAAUCCCGUCCGUCUGGUUAU - 133 |
Stem-loop(if miRNA) |
--        A                 G     C        CG    A      C  GC  CCG   AACCAGAC GACGGGAUUUUCGUUUG CCCAA UCGCCGGA  GACA ACCGUC GU  GG   A   |||||||| ||||||||||||||||| ||||| ||||||||  |||| |||||| ||  ||   G   UUGGUCUG CUGCCCUAAAGGCAGAU GGGUU AGCGGCCU  CUGU UGGCAG CA  CC   C UA        C                 G     U        AU    G      U  GA  AUA |
Stem-loop sequence | AACCAGACAGACGGGAUUUUCGUUUGGCCCAACUCGCCGGACGGACAAACCGUCCGUGCGGCCGAGCAUACCAGACUGACGGUGUGUCUAUCCGGCGAUUUGGGGUAGACGGAAAUCCCGUCCGUCUGGUUAU |