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BaseInfo

ncRNA ID novel_lus_miR99
Species Linum usitatissimum
Class miRNA
Genome position scaffold1122:477-618 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371;SRR2996369
Length 24
Mature sequence(if miRNA) 119 - AAAAGGCUAAUAUUUGACGUGUAU - 142
Stem-loop(if miRNA) --                  GAUCGG     U  GA     G            GC  -       U    U
  GCAUGUUAAAUAUUAGCC      AAAAU UU  AAUUU UAUUUCAAAAUU  UC AUUUCCA AGGU A
  ||||||||||||||||||      ||||| ||  ||||| ||||||||||||  || ||||||| ||||
  UGUGCAGUUUAUAAUCGG      UUUUA AA  UUAAA GUGGAGUUUUAA  AG UAAAGGU UCCA A
UA                  -AAAAA     U  AG     A            AU  C       U    U
Stem-loop sequence GCAUGUUAAAUAUUAGCCGAUCGGAAAAUUUUGAAAUUUGUAUUUCAAAAUUGCUCAUUUCCAUAGGUUAAUACCUUUGGAAAUCGAUAAAUUUUGAGGUGAAAAUUGAAAUAUUUUAAAAAGGCUAAUAUUUGACGUGUAU