ncRNA ID | novel_lus_miR99 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1122:477-618 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996371;SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AAAAGGCUAAUAUUUGACGUGUAU - 142 |
Stem-loop(if miRNA) |
--                  GAUCGG     U  GA     G            GC  -       U    U   GCAUGUUAAAUAUUAGCC      AAAAU UU  AAUUU UAUUUCAAAAUU  UC AUUUCCA AGGU A   ||||||||||||||||||      ||||| ||  ||||| ||||||||||||  || ||||||| ||||   UGUGCAGUUUAUAAUCGG      UUUUA AA  UUAAA GUGGAGUUUUAA  AG UAAAGGU UCCA A UA                  -AAAAA     U  AG     A            AU  C       U    U |
Stem-loop sequence | GCAUGUUAAAUAUUAGCCGAUCGGAAAAUUUUGAAAUUUGUAUUUCAAAAUUGCUCAUUUCCAUAGGUUAAUACCUUUGGAAAUCGAUAAAUUUUGAGGUGAAAAUUGAAAUAUUUUAAAAAGGCUAAUAUUUGACGUGUAU |