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BaseInfo

ncRNA ID novel_lus_miR87
Species Linum usitatissimum
Class miRNA
Genome position scaffold2093:460-664 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996369
Length 24
Mature sequence(if miRNA) 182 - AUUUGACAUGUAUGUUGGGAAUGA - 205
Stem-loop(if miRNA) --          U     G      ACUAAAA   GG   UUCAC    U   A    UC       AAC     CAAG       -AU    CUUA     C  AA
  AUUUGACAUG AUGUU GGAAUG       AUU  GGU     CAUG UAA CCCU  AAAUAAU   UAAAU    UUAAAAA   AUUU    AUACG UA  A
  |||||||||| ||||| ||||||       |||  |||     |||| ||| ||||  |||||||   |||||    |||||||   ||||    ||||| ||
  UAAGCUGUAC UACAA CUUUAC       UAA  UCA     GUAC AUU GGGA  UUUAUUA   GUUUA    AAUUUUU   UAAA    UGUGC AU  C
UA          C     A      CAAAUUA   AU   -----    C   G    UA       CCA     CAUA       AGU    ---A     U  AA
Stem-loop sequence AUUUGACAUGUAUGUUGGGAAUGACUAAAAAUUGGGGUUUCACCAUGUUAAACCCUUCAAAUAAUAACUAAAUCAAGUUAAAAAAUAUUUCUUAAUACGCUAAAACAAUAUCGUGUAAAAUUGAUUUUUAAAUACAUUUGACCAUUAUUUAUAGGGGUUACCAUGACUUAAAUAUUAAACCAUUUCAAACAUCCAUGUCGAAUAU