ncRNA ID | novel_lus_miR87 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2093:460-664 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 182 - AUUUGACAUGUAUGUUGGGAAUGA - 205 |
Stem-loop(if miRNA) |
--          U     G      ACUAAAA   GG   UUCAC    U   A    UC       AAC     CAAG       -AU    CUUA     C  AA   AUUUGACAUG AUGUU GGAAUG       AUU  GGU     CAUG UAA CCCU  AAAUAAU   UAAAU    UUAAAAA   AUUU    AUACG UA  A   |||||||||| ||||| ||||||       |||  |||     |||| ||| ||||  |||||||   |||||    |||||||   ||||    ||||| ||   UAAGCUGUAC UACAA CUUUAC       UAA  UCA     GUAC AUU GGGA  UUUAUUA   GUUUA    AAUUUUU   UAAA    UGUGC AU  C UA          C     A      CAAAUUA   AU   -----    C   G    UA       CCA     CAUA       AGU    ---A     U  AA |
Stem-loop sequence | AUUUGACAUGUAUGUUGGGAAUGACUAAAAAUUGGGGUUUCACCAUGUUAAACCCUUCAAAUAAUAACUAAAUCAAGUUAAAAAAUAUUUCUUAAUACGCUAAAACAAUAUCGUGUAAAAUUGAUUUUUAAAUACAUUUGACCAUUAUUUAUAGGGGUUACCAUGACUUAAAUAUUAAACCAUUUCAAACAUCCAUGUCGAAUAU |