Search result

BaseInfo

ncRNA ID novel_lus_miR86
Species Linum usitatissimum
Class miRNA
Genome position scaffold2017:550-720 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 148 - GACGUGCAUGUUAGAAAUGGCUAA - 171
Stem-loop(if miRNA) --         C                            UAAU     AAA     -     G      AUU  AUAUCCAUAGUAU
  AGUCAUUUC AACAUGCAUGUCGAAUAUUAGCCGAUUU    AUUUU   AGUUU CAUGU AAAAUU   CU             A
  ||||||||| ||||||||||||||||||||||||||||    |||||   ||||| ||||| ||||||   ||             G
  UCGGUAAAG UUGUACGUGCAGUUUAUAAUCGGUUAAA    UAAAA   UCAAA GUGCA UUUUAA   GC             C
AA         A                            -UUU     -AG     A     G      ---  AGUAAAAAGCACA
Stem-loop sequence AGUCAUUUCCAACAUGCAUGUCGAAUAUUAGCCGAUUUUAAUAUUUUAAAAGUUUCAUGUGAAAAUUAUUCUAUAUCCAUAGUAUAGCACACGAAAAAUGACGAAUUUUGACGUGAAAACUGAAAAAUUUUAAAUUGGCUAAUAUUUGACGUGCAUGUUAGAAAUGGCUAA