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BaseInfo

ncRNA ID novel_lus_miR85
Species Linum usitatissimum
Class miRNA
Genome position scaffold2011:1858-2026 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - AACAUGCAUGUUGGGAAUGGCUAA - 24
Stem-loop(if miRNA) -A         UG          C        G           UU    UG     UG  --       C       CAUAU U
  AGCCAUUUU  ACAUGCAUGU AAAUAUUA UCGAUUUGGAA  UUUU  AUUUU  UG  AAAAUGG UAGUUUC     G U
  |||||||||  |||||||||| |||||||| |||||||||||  ||||  |||||  ||  ||||||| |||||||     | A
  UCGGUAAGG  UGUACGUACA UUUAUAAU GGUUAAAUUUU  AAAA  UAAAA  AC  UUUUGUC GUUAAAG     C A
AA         GU          A        G           -C    GU     GU  AG       A       UUUCC G
Stem-loop sequence AAGCCAUUUUUGACAUGCAUGUCAAAUAUUAGUCGAUUUGGAAUUUUUUUGAUUUUUGUGAAAAUGGCUAGUUUCCAUAUGUUAAGCCCUUUGAAAUUGACUGUUUUGACAUGAAAAUUGAAAACUUUUAAAUUGGGUAAUAUUUAACAUGCAUGUUGGGAAUGGCUAA