ncRNA ID | novel_lus_miR85 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold2011:1858-2026 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAUGCAUGUUGGGAAUGGCUAA - 24 |
Stem-loop(if miRNA) |
-A         UG          C        G           UU    UG     UG  --       C       CAUAU U   AGCCAUUUU  ACAUGCAUGU AAAUAUUA UCGAUUUGGAA  UUUU  AUUUU  UG  AAAAUGG UAGUUUC     G U   |||||||||  |||||||||| |||||||| |||||||||||  ||||  |||||  ||  ||||||| |||||||     | A   UCGGUAAGG  UGUACGUACA UUUAUAAU GGUUAAAUUUU  AAAA  UAAAA  AC  UUUUGUC GUUAAAG     C A AA         GU          A        G           -C    GU     GU  AG       A       UUUCC G |
Stem-loop sequence | AAGCCAUUUUUGACAUGCAUGUCAAAUAUUAGUCGAUUUGGAAUUUUUUUGAUUUUUGUGAAAAUGGCUAGUUUCCAUAUGUUAAGCCCUUUGAAAUUGACUGUUUUGACAUGAAAAUUGAAAACUUUUAAAUUGGGUAAUAUUUAACAUGCAUGUUGGGAAUGGCUAA |