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BaseInfo

ncRNA ID novel_lus_miR74
Species Linum usitatissimum
Class miRNA
Genome position scaffold1642:5731-5931 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 178 - GACAUGCAUGUUGGAAAUAGCUAA - 201
Stem-loop(if miRNA) --              A   A   AA   A  UA      G  CAG   C    A    C    A     C U      A   UAA     CU  G   UG
  GACAUGCAUGUUGG AAU GCU  AAA UC  GUUUUA UA   UAA CCCU UAAA AAUG UUAAA G AGUUAA AAU   UUUUA  CG UCU  U
  |||||||||||||| ||| |||  ||| ||  |||||| ||   ||| |||| |||| |||| ||||| | |||||| |||   |||||  || |||
  CUGUACGUGCAACC UUA CGA  UUU AG  CAAAGU GU   AUU GGGA GUUU UUAU GGUUU C UCAAUU UUG   AAAGU  GU AGA  U
UU              C   G   AG   A  UC      G  ACA   U    A    A    C     A U      G   UAA     -U  A   UU
Stem-loop sequence GACAUGCAUGUUGGAAAUAGCUAAAAAAUCUAGUUUUAGUACAGUAACCCCUAUAAACAAUGAUUAAACGUAGUUAAAAAUUAAUUUUACUCGGUCUUGUUUUAGAAUGUUGAAAAAUGUUGUUAACUUCAUUUGGCUAUUAUUUGAAGGGUUUAACAUGGUGAAACCUGAAUUUGAAGCGAUUCCCAACGUGCAUGUCUU