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BaseInfo

ncRNA ID novel_lus_miR71
Species Linum usitatissimum
Class miRNA
Genome position scaffold1613:11-181 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 148 - GACAUGCAUGUUGGAUAUGGCUAA - 171
Stem-loop(if miRNA) --     -C     A       CC       CAA  ----------------A UUCACAAAAAUUCAAUUUUCAUAGCAAUAUGGUCAAUUUC
  GGCCA  UCCAA CAUGCAU  CAAAUAU   CC                 G                                        C
  |||||  ||||| |||||||  |||||||   ||                 |                                        A
  UCGGU  AGGUU GUACGUA  GUUUAUA   GG                 U                                        A
AA     AU     -       CA       AUC  CUAAAUUUUAAAAACUA AAAAGUACAAUUUUAUUAGGUAAAGGUAUCCAAUUGGUGA
Stem-loop sequence GGCCACUCCAAACAUGCAUCCCAAAUAUCAACCAGUUCACAAAAAUUCAAUUUUCAUAGCAAUAUGGUCAAUUUCCAAAGUGGUUAACCUAUGGAAAUGGAUUAUUUUAACAUGAAAAUAUCAAAAAUUUUAAAUCGGCUAAUAUUUGACAUGCAUGUUGGAUAUGGCUAA