Search result

BaseInfo

ncRNA ID novel_lus_miR60
Species Linum usitatissimum
Class miRNA
Genome position scaffold1486:6091-6247 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371;SRR2996369
Length 24
Mature sequence(if miRNA) 134 - UUGACAUGUAUGUUGGGAAUGGCU - 157
Stem-loop(if miRNA) --         U       -          GU        ------- -      UUC       G       U   UC  UU
  CCAUUUCCA CAUGCAU UCAAAUAUUA  CGAUUUGA       C AUUUUC   UUAAAAU GUCGAUU CCA  GG  A
  ||||||||| ||||||| ||||||||||  ||||||||       | ||||||   ||||||| ||||||| |||  ||
  GGUAAGGGU GUAUGUA AGUUUAUAAU  GUUAAAUU       G UAAAAG   AGUUUUA CGGUUAA GGU  CC  A
UC         U       C          AG        UUUUAAA A      UAC       A       C   UU  CC
Stem-loop sequence CCAUUUCCAUCAUGCAUUCAAAUAUUAGUCGAUUUGACAUUUUCUUCUUAAAAUGGUCGAUUUCCAUCGGUUAACCCCUUUGGCAAUUGGCAAUUUUGACAUGAAAAUAGAAAUUUUUUAAAUUGGAUAAUAUUUGACAUGUAUGUUGGGAAUGGCU