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BaseInfo

ncRNA ID novel_lus_miR57
Species Linum usitatissimum
Class miRNA
Genome position scaffold1053:188-386 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996372
Length 24
Mature sequence(if miRNA) 176 - GACGUGCAUGUUGGAAAUGGCUAA - 199
Stem-loop(if miRNA) --      C     -    A        AAAUCAU        A  A   C    A         A AAA             U      U  U  AUGUA
  GACGUG AUGUU GGAA UGGCUAAG       GUUUCACU UG UAA CCUU UAAAUAAUG C   AUGGAAUUAGAAA AAAAUU AC CG     A
  |||||| ||||| |||| ||||||||       |||||||| || ||| |||| ||||||||| |   ||||||||||||| |||||| || ||     U
  CUGUAC UACAA CCUU ACUGAUUU       UAAAGUGG AC AUU GGAA GUUUAUUAU G   UACUUUAAUUUUU UUUUAG UG GC     U
AA      A     A    -        AUAACUC        A  A   U    A         C GUA             -      U  -  CGGUU
Stem-loop sequence GACGUGCAUGUUGGAAAUGGCUAAGAAAUCAUGUUUCACUAUGAUAACCCUUAUAAAUAAUGACAAAAUGGAAUUAGAAAUAAAAUUUACUCGAUGUAAUUUUGGCCGGUUGAUUUUUUUUUAAUUUCAUAUGGCUAUUAUUUGAAAGGUUUAACAAGGUGAAAUCUCAAUAUUUAGUCAUUCCAAACAUACAUGUCAA