ncRNA ID | novel_lus_miR57 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1053:188-386 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 176 - GACGUGCAUGUUGGAAAUGGCUAA - 199 |
Stem-loop(if miRNA) |
--      C     -    A        AAAUCAU        A  A   C    A         A AAA             U      U  U  AUGUA   GACGUG AUGUU GGAA UGGCUAAG       GUUUCACU UG UAA CCUU UAAAUAAUG C   AUGGAAUUAGAAA AAAAUU AC CG     A   |||||| ||||| |||| ||||||||       |||||||| || ||| |||| ||||||||| |   ||||||||||||| |||||| || ||     U   CUGUAC UACAA CCUU ACUGAUUU       UAAAGUGG AC AUU GGAA GUUUAUUAU G   UACUUUAAUUUUU UUUUAG UG GC     U AA      A     A    -        AUAACUC        A  A   U    A         C GUA             -      U  -  CGGUU |
Stem-loop sequence | GACGUGCAUGUUGGAAAUGGCUAAGAAAUCAUGUUUCACUAUGAUAACCCUUAUAAAUAAUGACAAAAUGGAAUUAGAAAUAAAAUUUACUCGAUGUAAUUUUGGCCGGUUGAUUUUUUUUUAAUUUCAUAUGGCUAUUAUUUGAAAGGUUUAACAAGGUGAAAUCUCAAUAUUUAGUCAUUCCAAACAUACAUGUCAA |