Search result

BaseInfo

ncRNA ID novel_lus_miR54
Species Linum usitatissimum
Class miRNA
Genome position scaffold140:574169-574277 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371;SRR2996369
Length 22
Mature sequence(if miRNA) 1 - UGAACUCUCUCCCUCAACGGCC - 22
Stem-loop(if miRNA) --          CC  -       C  UU   -  --AU     --C  U       U
  UGAACUCUCU  CU CAACGGC AU  UUU CA    GAGGA   AG AGAUGAU A
  ||||||||||  || ||||||| ||  ||| ||    |||||   || |||||||
  ACUUGAGGGG  GA GUUGCCG UA  AGA GU    CUCCU   UC UCUACUA U
GU          CA  A       U  UU   C  CCUU     UCU  -       C
Stem-loop sequence UGAACUCUCUCCCUCAACGGCCAUUUUUUCAAUGAGGACAGUAGAUGAUUAUCAUCAUCUCUUCUUCCUCUUCCUGCAGAUUAUUGCCGUUGAAGACGGGGAGUUCAUG