ncRNA ID | novel_lus_miR54 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold140:574169-574277 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996371;SRR2996369 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGAACUCUCUCCCUCAACGGCC - 22 |
Stem-loop(if miRNA) |
--          CC  -       C  UU   -  --AU     --C  U       U   UGAACUCUCU  CU CAACGGC AU  UUU CA    GAGGA   AG AGAUGAU A   ||||||||||  || ||||||| ||  ||| ||    |||||   || |||||||   ACUUGAGGGG  GA GUUGCCG UA  AGA GU    CUCCU   UC UCUACUA U GU          CA  A       U  UU   C  CCUU     UCU  -       C |
Stem-loop sequence | UGAACUCUCUCCCUCAACGGCCAUUUUUUCAAUGAGGACAGUAGAUGAUUAUCAUCAUCUCUUCUUCCUCUUCCUGCAGAUUAUUGCCGUUGAAGACGGGGAGUUCAUG |