ncRNA ID | novel_lus_miR52 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold138:693054-693195 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AGGUACUGGAGCUGAUGGUGGGGA - 142 |
Stem-loop(if miRNA) |
--    U    -         CU AUU   AGA   A        - ----UA      CAC  AGUGCAUAUCA   UCUA CCAU AGUUUCAGU  C   UCG   AAA ACACGAAU C      GAUAGC   UC           C   |||| |||| |||||||||  |   |||   ||| |||||||| |      ||||||   ||   GGGU GGUA UCGAGGUCA  G   AGU   UUU UGUGUUUA G      CUAUUG   GU           U AG    -    G         UG -AU   GAA   A        U UUGUUC      UUU  AUAUACCCCAG |
Stem-loop sequence | UCUAUCCAUAGUUUCAGUCUCAUUUCGAGAAAAAACACGAAUCUAGAUAGCCACUCAGUGCAUAUCACUGACCCCAUAUAUGUUUGUUAUCCUUGUUGUAUUUGUGUAUUUAAGUGAUAGGUACUGGAGCUGAUGGUGGGGA |