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BaseInfo

ncRNA ID novel_lus_miR52
Species Linum usitatissimum
Class miRNA
Genome position scaffold138:693054-693195 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996369
Length 24
Mature sequence(if miRNA) 119 - AGGUACUGGAGCUGAUGGUGGGGA - 142
Stem-loop(if miRNA) --    U    -         CU AUU   AGA   A        - ----UA      CAC  AGUGCAUAUCA
  UCUA CCAU AGUUUCAGU  C   UCG   AAA ACACGAAU C      GAUAGC   UC           C
  |||| |||| |||||||||  |   |||   ||| |||||||| |      ||||||   ||
  GGGU GGUA UCGAGGUCA  G   AGU   UUU UGUGUUUA G      CUAUUG   GU           U
AG    -    G         UG -AU   GAA   A        U UUGUUC      UUU  AUAUACCCCAG
Stem-loop sequence UCUAUCCAUAGUUUCAGUCUCAUUUCGAGAAAAAACACGAAUCUAGAUAGCCACUCAGUGCAUAUCACUGACCCCAUAUAUGUUUGUUAUCCUUGUUGUAUUUGUGUAUUUAAGUGAUAGGUACUGGAGCUGAUGGUGGGGA