ncRNA ID | novel_lus_miR50 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1334:228-366 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 116 - AUUGACUAAUAUUUGGCAGGCAUG - 139 |
Stem-loop(if miRNA) |
--   UC  A         C       A   U   GA      CU   U         CAUUG   U  GUU   UGC  GU AAAUAUUAG CGAUUUG AAU UUU  AAUUUU  UGU AAAAUGGUU     CCA AG   A   |||  || ||||||||| ||||||| ||| |||  ||||||  ||| |||||||||     ||| ||   ACG  CG UUUAUAAUC GUUAAAC UUA AAA  UUAAAA  ACA UUUUACUAA     GGU UC   A GU   GA  G         A       G   C   -G      AC   C         ----A   U  ACU |
Stem-loop sequence | UGCUCGUAAAAUAUUAGCCGAUUUGAAAUUUUUGAAAUUUUCUUGUUAAAAUGGUUCAUUGCCAUAGGUUAAUCACUUUGGAAAUCAUUUUCACACAAAAAUUGAAACAUUGCAAAUUGACUAAUAUUUGGCAGGCAUG |