ncRNA ID | novel_lus_miR49 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1334:229-365 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AAUUGACUAAUAUUUGGCAGGCAU - 137 |
Stem-loop(if miRNA) |
--  UC  A         C       A   U   GA      CU   U         CAUUG   U  GUU   GC  GU AAAUAUUAG CGAUUUG AAU UUU  AAUUUU  UGU AAAAUGGUU     CCA AG   A   ||  || ||||||||| ||||||| ||| |||  ||||||  ||| |||||||||     ||| ||   CG  CG UUUAUAAUC GUUAAAC UUA AAA  UUAAAA  ACA UUUUACUAA     GGU UC   A UA  GA  G         A       G   C   -G      AC   C         ----A   U  ACU |
Stem-loop sequence | GCUCGUAAAAUAUUAGCCGAUUUGAAAUUUUUGAAAUUUUCUUGUUAAAAUGGUUCAUUGCCAUAGGUUAAUCACUUUGGAAAUCAUUUUCACACAAAAAUUGAAACAUUGCAAAUUGACUAAUAUUUGGCAGGCAU |