ncRNA ID | novel_lus_miR47 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold132:6589-6761 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 150 - GGCAUACAUGUUGGAAAUGACUAA - 173 |
Stem-loop(if miRNA) |
---A   A  A        C      A      A           U    -U      CA   C       G    -        U  U     UCA UU CCAACAUG AUGUCA AUAUUA CUAAUUUGAAA UUUU  AAUUUU  UGU AAAAUUG UCAA UUUCCAUG GU A     ||| || |||||||| |||||| |||||| ||||||||||| ||||  ||||||  ||| ||||||| |||| |||||||| || U     AGU AA GGUUGUAC UACGGU UAUAAU GGUUAAACUUU AAAA  UUGAAA  ACA UUUUAAU AGUU AAAGGUAU CA A AAUC   A  -        A      G      C           U    CU      UA   C       -    U        -  A |
Stem-loop sequence | AUCAAUUACCAACAUGCAUGUCAAAUAUUAACUAAUUUGAAAUUUUUUAAUUUUCAUGUCAAAAUUGGUCAAUUUCCAUGUGUUAUAAACUAUGGAAAUUUGAUAAUUUUCACAAUAAAGUUUCAAAAUUUUCAAAUUGGCUAAUAUGUGGCAUACAUGUUGGAAAUGACUAA |