ncRNA ID | novel_lus_miR45 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold1317:268613-268749 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGACUGAGUUUUAGUUUGGCUUG - 24 |
Stem-loop(if miRNA) |
--A    U              C   GUAA     U           GUUCGAUU UG       -AC    A    GGAC GAGUUUUAGUUUGG UUG    UUCGG CGAAUUUGGUU        U  AAAUUGA   UCGU U    |||| |||||||||||||| |||    ||||| |||||||||||        |  |||||||   ||||    UUUG UUCAGGGUUAAAUU AAU    AAGUU GUUUAAGCCAA        G  UUUAGCU   GGUA A AAA    U              -   ACUC     -           ------AU GU       GGU    A |
Stem-loop sequence | AGGACUGAGUUUUAGUUUGGCUUGGUAAUUCGGUCGAAUUUGGUUGUUCGAUUUUGAAAUUGAACUCGUAUAAAUGGUGGUCGAUUUUGGUAAACCGAAUUUGUUGAACUCAUAAUUAAAUUGGGACUUUGUUUAAA |