Search result

BaseInfo

ncRNA ID novel_lus_miR45
Species Linum usitatissimum
Class miRNA
Genome position scaffold1317:268613-268749 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - AGGACUGAGUUUUAGUUUGGCUUG - 24
Stem-loop(if miRNA) --A    U              C   GUAA     U           GUUCGAUU UG       -AC    A
   GGAC GAGUUUUAGUUUGG UUG    UUCGG CGAAUUUGGUU        U  AAAUUGA   UCGU U
   |||| |||||||||||||| |||    ||||| |||||||||||        |  |||||||   ||||
   UUUG UUCAGGGUUAAAUU AAU    AAGUU GUUUAAGCCAA        G  UUUAGCU   GGUA A
AAA    U              -   ACUC     -           ------AU GU       GGU    A
Stem-loop sequence AGGACUGAGUUUUAGUUUGGCUUGGUAAUUCGGUCGAAUUUGGUUGUUCGAUUUUGAAAUUGAACUCGUAUAAAUGGUGGUCGAUUUUGGUAAACCGAAUUUGUUGAACUCAUAAUUAAAUUGGGACUUUGUUUAAA