ncRNA ID | novel_lus_miR40 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold98:805948-806118 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGCAUGCAUGUUGGAAAUGACUAA - 24 |
Stem-loop(if miRNA) |
--AA                            AUUA        ACAUUUAA     A   C     U     -C      -   C     UCAUUUCCAACAUGCAUGUCAAAUAUUA    AUUUGAAA        UUUUU UGU AAAAU GUCAA  UUUCGU GUG U     ||||||||||||||||||||||||||||    ||||||||        ||||| ||| ||||| |||||  |||||| ||| A     AGUAAAGGUUGUACGUACGGUUUAUAAU    UAAAUUUU        AAAAA AUA UUUUA CAGUU  AAAGUA CAU U AAUC                            CCAC        AAAAACUA     A   U     C     AA      U   A |
Stem-loop sequence | AAUCAUUUCCAACAUGCAUGUCAAAUAUUAAUUAAUUUGAAAACAUUUAAUUUUUAUGUCAAAAUUGUCAACUUUCGUGUGCUAUAUACUAUGAAAAAUUGACCAUUUUUAUAAAAAAAAUCAAAAAUUUUAAAUCACCUAAUAUUUGGCAUGCAUGUUGGAAAUGACUAA |