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BaseInfo

ncRNA ID novel_lus_miR40
Species Linum usitatissimum
Class miRNA
Genome position scaffold98:805948-806118 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - GGCAUGCAUGUUGGAAAUGACUAA - 24
Stem-loop(if miRNA) --AA                            AUUA        ACAUUUAA     A   C     U     -C      -   C
    UCAUUUCCAACAUGCAUGUCAAAUAUUA    AUUUGAAA        UUUUU UGU AAAAU GUCAA  UUUCGU GUG U
    ||||||||||||||||||||||||||||    ||||||||        ||||| ||| ||||| |||||  |||||| ||| A
    AGUAAAGGUUGUACGUACGGUUUAUAAU    UAAAUUUU        AAAAA AUA UUUUA CAGUU  AAAGUA CAU U
AAUC                            CCAC        AAAAACUA     A   U     C     AA      U   A
Stem-loop sequence AAUCAUUUCCAACAUGCAUGUCAAAUAUUAAUUAAUUUGAAAACAUUUAAUUUUUAUGUCAAAAUUGUCAACUUUCGUGUGCUAUAUACUAUGAAAAAUUGACCAUUUUUAUAAAAAAAAUCAAAAAUUUUAAAUCACCUAAUAUUUGGCAUGCAUGUUGGAAAUGACUAA