Search result

BaseInfo

ncRNA ID novel_lus_miR39
Species Linum usitatissimum
Class miRNA
Genome position scaffold98:805950-806116 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - UUGGCAUGCAUGUUGGAAAUGACU - 24
Stem-loop(if miRNA) --                            AUUA        ACAUUUAA     A   C     U     -C      -   C
  UCAUUUCCAACAUGCAUGUCAAAUAUUA    AUUUGAAA        UUUUU UGU AAAAU GUCAA  UUUCGU GUG U
  ||||||||||||||||||||||||||||    ||||||||        ||||| ||| ||||| |||||  |||||| ||| A
  AGUAAAGGUUGUACGUACGGUUUAUAAU    UAAAUUUU        AAAAA AUA UUUUA CAGUU  AAAGUA CAU U
UC                            CCAC        AAAAACUA     A   U     C     AA      U   A
Stem-loop sequence UCAUUUCCAACAUGCAUGUCAAAUAUUAAUUAAUUUGAAAACAUUUAAUUUUUAUGUCAAAAUUGUCAACUUUCGUGUGCUAUAUACUAUGAAAAAUUGACCAUUUUUAUAAAAAAAAUCAAAAAUUUUAAAUCACCUAAUAUUUGGCAUGCAUGUUGGAAAUGACU