ncRNA ID | novel_lus_miR38 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold98:714958-715105 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 125 - AUCGACUAAUAUUUGACAUGCAUA - 148 |
Stem-loop(if miRNA) |
--                 C      A        -C       AUUUC     U   A  U    AAG         UGCAUGUCAAAUAUUAG CGAUUU AAAAUUUU  AAUUUUU     AAAAU GUC AU UUCA   GGGUUAU   ||||||||||||||||| |||||| ||||||||  |||||||     ||||| ||| || ||||   ||||||A   ACGUACAGUUUAUAAUC GCUAAA UUUUAAAA  UUAAAAG     UUUUA CAG UA AAGU   UCCAAUU AU                 A      C        CU       AACAC     C   C  C    --A       |
Stem-loop sequence | UGCAUGUCAAAUAUUAGCCGAUUUAAAAAUUUUCAAUUUUUAUUUCAAAAUUGUCAAUUUUCAAAGGGGUUAUAUUAACCUAUGAACAUCGACCAUUUUCACAAGAAAAUUUCAAAAUUUUCAAAUCGACUAAUAUUUGACAUGCAUA |