ncRNA ID | novel_lus_miR30 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold911:25570-25741 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACAUGUAUGUUGGAAAUGGCUAA - 24 |
Stem-loop(if miRNA) |
--AA        U        U            CA       AA       --UUUUC           U    A      U   UU     CCAUUUCC ACAUAUAU UUAAAUAUUAGC  AUUUGAA  UUUUUGA       AUGUGAAAAUG UUCA UUUCCA AGG  A     |||||||| |||||||| ||||||||||||  |||||||  |||||||       ||||||||||| |||| |||||| |||     GGUAAAGG UGUAUGUA AGUUUAUAAUCG  UAAAUUU  AAAAACU       UACACUUUUAC AGGU AAAGGU UCC  A AAUC        U        C            AC       -A       UUUAACA           C    -      U   CC |
Stem-loop sequence | AACCAUUUCCUACAUAUAUUUUAAAUAUUAGCCAAUUUGAAAAUUUUUGAUUUUCAUGUGAAAAUGUUUCAAUUUCCAUAGGUUAACCCCUUUGGAAAUGGACCAUUUUCACAUACAAUUUUCAAAAAAUUUAAAUCAGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA |