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BaseInfo

ncRNA ID novel_lus_miR30
Species Linum usitatissimum
Class miRNA
Genome position scaffold911:25570-25741 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370
Length 24
Mature sequence(if miRNA) 1 - GACAUGUAUGUUGGAAAUGGCUAA - 24
Stem-loop(if miRNA) --AA        U        U            CA       AA       --UUUUC           U    A      U   UU
    CCAUUUCC ACAUAUAU UUAAAUAUUAGC  AUUUGAA  UUUUUGA       AUGUGAAAAUG UUCA UUUCCA AGG  A
    |||||||| |||||||| ||||||||||||  |||||||  |||||||       ||||||||||| |||| |||||| |||
    GGUAAAGG UGUAUGUA AGUUUAUAAUCG  UAAAUUU  AAAAACU       UACACUUUUAC AGGU AAAGGU UCC  A
AAUC        U        C            AC       -A       UUUAACA           C    -      U   CC
Stem-loop sequence AACCAUUUCCUACAUAUAUUUUAAAUAUUAGCCAAUUUGAAAAUUUUUGAUUUUCAUGUGAAAAUGUUUCAAUUUCCAUAGGUUAACCCCUUUGGAAAUGGACCAUUUUCACAUACAAUUUUCAAAAAAUUUAAAUCAGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA