ncRNA ID | novel_lus_miR27 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold8:410297-410445 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996371 |
Length | 24 |
Mature sequence(if miRNA) | 126 - GACAUGGAUGUUGAAAAUGGCUAA - 149 |
Stem-loop(if miRNA) |
--               G  CA G    A           -U        CUUCUGU  A  GU  AUU    UC  UU   AGUCAUUUUCAACAU CA  U AAAU UUAGCUAAUUU  AAAAUUUC       AA UG  CA   UUCA  GG  A   ||||||||||||||| ||  | |||| |||||||||||  ||||||||       || ||  ||   ||||  ||   UCGGUAAAAGUUGUA GU  A UUUA AAUCGAUUAAA  UUUUAAAG       UU AC  GU   AGGU  CC  A AA               G  AC G    C           UU        -------  A  UG  -AU    UU  CA |
Stem-loop sequence | AGUCAUUUUCAACAUGCACAUGAAAUAUUAGCUAAUUUUAAAAUUUCCUUCUGUAAAUGGUCAAUUUUCAUCGGUUAAACCCUUUGGAUAUGGUCAAUUGAAAUUUUUUAAAUUAGCUAACAUUUGACAUGGAUGUUGAAAAUGGCUAA |