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BaseInfo

ncRNA ID novel_lus_miR27
Species Linum usitatissimum
Class miRNA
Genome position scaffold8:410297-410445 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996371
Length 24
Mature sequence(if miRNA) 126 - GACAUGGAUGUUGAAAAUGGCUAA - 149
Stem-loop(if miRNA) --               G  CA G    A           -U        CUUCUGU  A  GU  AUU    UC  UU
  AGUCAUUUUCAACAU CA  U AAAU UUAGCUAAUUU  AAAAUUUC       AA UG  CA   UUCA  GG  A
  ||||||||||||||| ||  | |||| |||||||||||  ||||||||       || ||  ||   ||||  ||
  UCGGUAAAAGUUGUA GU  A UUUA AAUCGAUUAAA  UUUUAAAG       UU AC  GU   AGGU  CC  A
AA               G  AC G    C           UU        -------  A  UG  -AU    UU  CA
Stem-loop sequence AGUCAUUUUCAACAUGCACAUGAAAUAUUAGCUAAUUUUAAAAUUUCCUUCUGUAAAUGGUCAAUUUUCAUCGGUUAAACCCUUUGGAUAUGGUCAAUUGAAAUUUUUUAAAUUAGCUAACAUUUGACAUGGAUGUUGAAAAUGGCUAA