ncRNA ID | novel_lus_miR20 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold783:1195994-1196165 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996370;SRR2996372 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACAUGUAUGUUGGAAAUGGCUAA - 24 |
Stem-loop(if miRNA) |
--AA     C      CG              CU A             -C                 U    UG    CAA   GG     UCAUU CCAACA  UAUGUUAAAUAUUA  C AUUUGAAAAUUUU  AAUUUUCAUGUCAAAAU GGUU  UUUC   AGG  U     ||||| ||||||  ||||||||||||||  | |||||||||||||  ||||||||||||||||| ||||  ||||   |||     GGUAA GGUUGU  GUACAGUUUAUAAU  G UAAACUUUUAAAA  UUAAAAGUACAGUUUUA CCGA  AAAG   UCC  U AAUC     A      AU              CG A             CU                 -    GU    AUA   AA |
Stem-loop sequence | AAUCAUUCCCAACACGUAUGUUAAAUAUUACUCAAUUUGAAAAUUUUCAAUUUUCAUGUCAAAAUUGGUUUGUUUCCAAAGGGGUUAACCUAUAGAAAUGAGCCAUUUUGACAUGAAAAUUUCAAAAUUUUCAAAUAGGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA |