Search result

BaseInfo

ncRNA ID novel_lus_miR20
Species Linum usitatissimum
Class miRNA
Genome position scaffold783:1195994-1196165 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996370;SRR2996372
Length 24
Mature sequence(if miRNA) 1 - GACAUGUAUGUUGGAAAUGGCUAA - 24
Stem-loop(if miRNA) --AA     C      CG              CU A             -C                 U    UG    CAA   GG
    UCAUU CCAACA  UAUGUUAAAUAUUA  C AUUUGAAAAUUUU  AAUUUUCAUGUCAAAAU GGUU  UUUC   AGG  U
    ||||| ||||||  ||||||||||||||  | |||||||||||||  ||||||||||||||||| ||||  ||||   |||
    GGUAA GGUUGU  GUACAGUUUAUAAU  G UAAACUUUUAAAA  UUAAAAGUACAGUUUUA CCGA  AAAG   UCC  U
AAUC     A      AU              CG A             CU                 -    GU    AUA   AA
Stem-loop sequence AAUCAUUCCCAACACGUAUGUUAAAUAUUACUCAAUUUGAAAAUUUUCAAUUUUCAUGUCAAAAUUGGUUUGUUUCCAAAGGGGUUAACCUAUAGAAAUGAGCCAUUUUGACAUGAAAAUUUCAAAAUUUUCAAAUAGGCUAAUAUUUGACAUGUAUGUUGGAAAUGGCUAA