ncRNA ID | novel_lus_miR1 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold101:450661-450836 [-] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | ERR1611433;ERR1611436;ERR1611439 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGGGGUGAAGGGAGCUCCCC - 21 |
Stem-loop(if miRNA) |
--          C C      AUU        AGUUC   UC -   U  G    G  G     U    AAU          -----    -  G   GGAGUUCUUU C CCCCAA   GAAAGGGA     UGG  G GAG GG CACA CU CUGGU CAUG   ACCCUAUCGG     GAUU GC C   |||||||||| | ||||||   ||||||||     |||  | ||| || |||| || ||||| ||||   ||||||||||     |||| ||   CCUCGAGGGA G GGGGUU   UUUUUCCU     ACC  C CUU UC GUGU GA GAUCG GUAC   UGGGAUAGCC     CUAA CG U CC          A U      -CG        -----   UU A   -  G    A  G     C    GUU          AUAAA    A  C |
Stem-loop sequence | GGAGUUCUUUCCCCCCCAAAUUGAAAGGGAAGUUCUGGUCGGAGUGGGCACAGCUGCUGGUUCAUGAAUACCCUAUCGGGAUUGCGCUCGCAAAUCAAAUACCGAUAGGGUUUGCAUGCGCUAGGAGAUGUGGCUUUCACUUCCAUCCUUUUUGCUUGGGGUGAAGGGAGCUCCCC |