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BaseInfo

ncRNA ID novel_lus_miR1
Species Linum usitatissimum
Class miRNA
Genome position scaffold101:450661-450836 [-]
Reference genome Lusitatissimum_200_BGIv1.0
Source ERR1611433;ERR1611436;ERR1611439
Length 21
Mature sequence(if miRNA) 1 - UUGGGGUGAAGGGAGCUCCCC - 21
Stem-loop(if miRNA) --          C C      AUU        AGUUC   UC -   U  G    G  G     U    AAU          -----    -  G
  GGAGUUCUUU C CCCCAA   GAAAGGGA     UGG  G GAG GG CACA CU CUGGU CAUG   ACCCUAUCGG     GAUU GC C
  |||||||||| | ||||||   ||||||||     |||  | ||| || |||| || ||||| ||||   ||||||||||     |||| ||
  CCUCGAGGGA G GGGGUU   UUUUUCCU     ACC  C CUU UC GUGU GA GAUCG GUAC   UGGGAUAGCC     CUAA CG U
CC          A U      -CG        -----   UU A   -  G    A  G     C    GUU          AUAAA    A  C
Stem-loop sequence GGAGUUCUUUCCCCCCCAAAUUGAAAGGGAAGUUCUGGUCGGAGUGGGCACAGCUGCUGGUUCAUGAAUACCCUAUCGGGAUUGCGCUCGCAAAUCAAAUACCGAUAGGGUUUGCAUGCGCUAGGAGAUGUGGCUUUCACUUCCAUCCUUUUUGCUUGGGGUGAAGGGAGCUCCCC