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BaseInfo

ncRNA ID novel_jre_miR1054
Species Juglans regia
Class miRNA
Genome position NW_017443602.1:853085-853259 [-]
Reference genome wgs.5d
Source SRR1168886
Length 24
Mature sequence(if miRNA) 1 - AGAGAGGAUUAGUAGAUGGAUGCU - 24
Stem-loop(if miRNA) --                                      A                   ---A     ---UGGU        -     U
  CAUCCAUCUGCUGAUCCUCUCUCAUUUGCAAGAAGGUG UUCCUUAAUUUUCUCUUUU    UUAUU       UGAUGAGA AUAUA A
  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||       |||||||| |||||
  GUAGGUAGAUGAUUAGGAGAGAGUAAAUGUUCUUUCAC AAGGAGUUAAAAGAGAAAA    AAUAG       GUUAUUUU UAUAU U
UC                                      C                   GAAG     UUGGUUU        C     A
Stem-loop sequence CAUCCAUCUGCUGAUCCUCUCUCAUUUGCAAGAAGGUGAUUCCUUAAUUUUCUCUUUUAUUAUUUGGUUGAUGAGAAUAUAUAUAUAUAUCUUUUAUUGUUUGGUUGAUAAGAAGAAAAGAGAAAAUUGAGGAACCACUUUCUUGUAAAUGAGAGAGGAUUAGUAGAUGGAUGCU