ncRNA ID | novel_jre_miR1054 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443602.1:853085-853259 [-] |
Reference genome | wgs.5d |
Source | SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAGGAUUAGUAGAUGGAUGCU - 24 |
Stem-loop(if miRNA) |
--                                      A                   ---A     ---UGGU        -     U   CAUCCAUCUGCUGAUCCUCUCUCAUUUGCAAGAAGGUG UUCCUUAAUUUUCUCUUUU    UUAUU       UGAUGAGA AUAUA A   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||       |||||||| |||||   GUAGGUAGAUGAUUAGGAGAGAGUAAAUGUUCUUUCAC AAGGAGUUAAAAGAGAAAA    AAUAG       GUUAUUUU UAUAU U UC                                      C                   GAAG     UUGGUUU        C     A |
Stem-loop sequence | CAUCCAUCUGCUGAUCCUCUCUCAUUUGCAAGAAGGUGAUUCCUUAAUUUUCUCUUUUAUUAUUUGGUUGAUGAGAAUAUAUAUAUAUAUCUUUUAUUGUUUGGUUGAUAAGAAGAAAAGAGAAAAUUGAGGAACCACUUUCUUGUAAAUGAGAGAGGAUUAGUAGAUGGAUGCU |