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BaseInfo

ncRNA ID	novel_jre_miR1052
Species	Juglans regia
Class	miRNA
Genome position	NW_017388926.1:1271343-1271482 [+]
Reference genome	wgs.5d
Source	SRR1168886
Length	24
Mature sequence(if miRNA)	117 - GAGGAUGAUAGAAAUUGGGAUGAU - 140
Stem-loop(if miRNA)	--    -AAU     C          C      UC     A  G           AGG   ACAAAUGAAAU   CAUC    UUUCU AUCAUCCUCU AUUAUC  AUGAU UG CAUUAGAUGAU   UUC           A   ||||    ||||| |||||||||| ||||||  ||||| || |||||||||||   |||   GUAG    AAAGA UAGUAGGAGG UAGUAG  UACUA AC GUAAUUUACUA   CUU           G UA    GGUU     -          U      GA     C  A           --A   UUAAUAAAUAA
Stem-loop sequence	CAUCAAUUUUCUCAUCAUCCUCUCAUUAUCUCAUGAUAUGGCAUUAGAUGAUAGGUUCACAAAUGAAAUAGAAUAAAUAAUUUUCAAUCAUUUAAUGACACAUCAUAGGAUGAUUGGAGGAUGAUAGAAAUUGGGAUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018978905.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:1982   GGUACCCAAAUUUCUAUCAUUCUC   2005 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109001556 (LOC109001556), mRNA	NA	coding protein	psRNATarget
XM_019003947.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:2684   GGUACCCAAAUUUCUAUCAUUCUC   2707 Target Full Sequence	2.5	PREDICTED: Juglans regia putative uncharacterized protein DDB_G0277255 (LOC109021330), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019003946.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:2712   GGUACCCAAAUUUCUAUCAUUCUC   2735 Target Full Sequence	2.5	PREDICTED: Juglans regia putative uncharacterized protein DDB_G0277255 (LOC109021330), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019003944.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:2714   GGUACCCAAAUUUCUAUCAUUCUC   2737 Target Full Sequence	2.5	PREDICTED: Juglans regia putative uncharacterized protein DDB_G0277255 (LOC109021330), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019003945.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:2715   GGUACCCAAAUUUCUAUCAUUCUC   2738 Target Full Sequence	2.5	PREDICTED: Juglans regia putative uncharacterized protein DDB_G0277255 (LOC109021330), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019003943.1	ncRNA:24   UAGUAGGGUUAAAGAUAGUAGGAG   1   =*=|*||*||||||||||||=||| targets:2717   GGUACCCAAAUUUCUAUCAUUCUC   2740 Target Full Sequence	2.5	PREDICTED: Juglans regia putative uncharacterized protein DDB_G0277255 (LOC109021330), transcript variant X1, mRNA	NA	coding protein	psRNATarget