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BaseInfo

ncRNA ID novel_jre_miR1050
Species Juglans regia
Class miRNA
Genome position NW_017438002.1:102769-102927 [+]
Reference genome wgs.5d
Source SRR1168886
Length 24
Mature sequence(if miRNA) 1 - UUCUACUCAUCAUCCCUACACCAC - 24
Stem-loop(if miRNA) --                    CC    AC    CU         U      U    ----ACUC   CAAAACUAAAGGA
  UUCUACUCAUCAUCCCUACA  ACAC  UAUA  UGAUUUUUU UUUUUU UUUU        UUG             A
  ||||||||||||||||||||  ||||  ||||  ||||||||| |||||| ||||        |||             U
  AGGAUGAGUAGUAGGGAUGU  UGUG  AUGU  ACUAAAAAA AAAAAA AAAA        CCU             U
UU                    AA    CA    UU         U      U    AACACAUA   ACUACUCAUCUUA
Stem-loop sequence UUCUACUCAUCAUCCCUACACCACACACUAUACUUGAUUUUUUUUUUUUUUUUUUACUCUUGCAAAACUAAAGGAAUUAUUCUACUCAUCAUCCAUACACAAAAAAUAAAAAAUAAAAAAUCAUUUGUAACGUGUAAUGUAGGGAUGAUGAGUAGGAUU