ncRNA ID | novel_jre_miR1050 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017438002.1:102769-102927 [+] |
Reference genome | wgs.5d |
Source | SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCUACUCAUCAUCCCUACACCAC - 24 |
Stem-loop(if miRNA) |
--                    CC    AC    CU         U      U    ----ACUC   CAAAACUAAAGGA   UUCUACUCAUCAUCCCUACA  ACAC  UAUA  UGAUUUUUU UUUUUU UUUU        UUG             A   ||||||||||||||||||||  ||||  ||||  ||||||||| |||||| ||||        |||             U   AGGAUGAGUAGUAGGGAUGU  UGUG  AUGU  ACUAAAAAA AAAAAA AAAA        CCU             U UU                    AA    CA    UU         U      U    AACACAUA   ACUACUCAUCUUA |
Stem-loop sequence | UUCUACUCAUCAUCCCUACACCACACACUAUACUUGAUUUUUUUUUUUUUUUUUUACUCUUGCAAAACUAAAGGAAUUAUUCUACUCAUCAUCCAUACACAAAAAAUAAAAAAUAAAAAAUCAUUUGUAACGUGUAAUGUAGGGAUGAUGAGUAGGAUU |