ncRNA ID | novel_jre_miR1049 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017436739.1:1337-1428 [+] |
Reference genome | wgs.5d |
Source | SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 69 - UUGCAAUAAGUUGGUCAUAAAAAC - 92 |
Stem-loop(if miRNA) |
--A          GU A   U    G   U       UA      A    UUUGUGACCA  U AUU CAAC AAA GAUUAUU  CAAUUA A    ||||||||||  | ||| |||| ||| |||||||  ||||||    AAAUACUGGU  A UAA GUUG UUU CUGAUAA  GUUGAU A CAA          UG A   C    G   U       GC      U |
Stem-loop sequence | AUUUGUGACCAGUUAAUUUCAACGAAAUGAUUAUUUACAAUUAAAAUUAGUUGCGAAUAGUCUUUUGGUUGCAAUAAGUUGGUCAUAAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018956697.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108984666 (LOC108984666), mRNA | NA | coding protein | psRNATarget |