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BaseInfo

ncRNA ID novel_jre_miR1049
Species Juglans regia
Class miRNA
Genome position NW_017436739.1:1337-1428 [+]
Reference genome wgs.5d
Source SRR1168886
Length 24
Mature sequence(if miRNA) 69 - UUGCAAUAAGUUGGUCAUAAAAAC - 92
Stem-loop(if miRNA) --A          GU A   U    G   U       UA      A
   UUUGUGACCA  U AUU CAAC AAA GAUUAUU  CAAUUA A
   ||||||||||  | ||| |||| ||| |||||||  ||||||
   AAAUACUGGU  A UAA GUUG UUU CUGAUAA  GUUGAU A
CAA          UG A   C    G   U       GC      U
Stem-loop sequence AUUUGUGACCAGUUAAUUUCAACGAAAUGAUUAUUUACAAUUAAAAUUAGUUGCGAAUAGUCUUUUGGUUGCAAUAAGUUGGUCAUAAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018956697.1
ncRNA:24   CAAAAAUACUGGUUGAAUAACGUU   1
  *****||||||||||||=|||||*
targets:2191   AGCAAUAUGACCAACUUGUUGCAC   2214

2.5 PREDICTED: Juglans regia uncharacterized LOC108984666 (LOC108984666), mRNA NA coding protein psRNATarget