ncRNA ID | novel_jre_miR1048 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389839.1:30670-30821 [-] |
Reference genome | wgs.5d |
Source | SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 129 - AGAAUUUUGUGUCUCAUCUCACCC - 152 |
Stem-loop(if miRNA) |
--                     CC    A   U     CAUGUCU     CU       AU     GAA GG  AU   AGAAUUUUGUGUCUCAUCUCA  CCCC AAC UGCCC       AUGGG  AAGGCUA  GUAAU   U  UG  G   |||||||||||||||||||||  |||| ||| |||||       |||||  |||||||  |||||   |  ||   UCUUAAAAUACAGAGUAGGGU  GGGG UUG ACGGG       UAUCU  UUUUGAU  UAUUG   G  GC  A AC                     AC    A   U     AUUUUUC     -U       CU     -AG UU  GU |
Stem-loop sequence | AGAAUUUUGUGUCUCAUCUCACCCCCCAAACUUGCCCCAUGUCUAUGGGCUAAGGCUAAUGUAAUGAAUGGUGAUGAUGCGUUGGAGUUAUUCUAGUUUUUUCUAUCUUUUUAGGGCAUGUUAGGGGCAUGGGAUGAGACAUAAAAUUCUCA |