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BaseInfo

ncRNA ID	novel_jre_miR1046
Species	Juglans regia
Class	miRNA
Genome position	NW_017389496.1:524761-524875 [-]
Reference genome	wgs.5d
Source	SRR1168884
Length	24
Mature sequence(if miRNA)	1 - AGAGAUGAUAAGUAGAAUUAUUCU - 24
Stem-loop(if miRNA)	--   U               - ----               GUUAUAAAAAAAGAUAAA   AAU GUUCUACUUAUUAUC C    AUACACCACAUACUU                  A   ||| ||||||||||||||| |    |||||||||||||||   UUA UAAGAUGAAUAGUAG G    UGUGUGGUGUGUGAA                  A UC   U               A AUCA               GUGGAUAAAAUAAAAUAA
Stem-loop sequence	AAUUGUUCUACUUAUUAUCCAUACACCACAUACUUGUUAUAAAAAAAGAUAAAAAAAUAAAAUAAAAUAGGUGAAGUGUGUGGUGUGUACUAGAGAUGAUAAGUAGAAUUAUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018952642.1	ncRNA:24   UCUUAUUAAGAUGAAUAGUAGAGA   1   |||=*|||*||||||||||||||* targets:605   AGAGGAAUGCUACUUAUCAUCUCA   628 Target Full Sequence	2.0	PREDICTED: Juglans regia probable choline kinase 2 (LOC108981461), mRNA	NA	coding protein	psRNATarget
XM_018991031.1	ncRNA:24   UCUUAUUAAGAUGAAUAGUAGAGA   1   |||=*|||*||||||||||||||* targets:1466   AGAGGAAUGCUACUUAUCAUCUCA   1489 Target Full Sequence	2.0	PREDICTED: Juglans regia probable choline kinase 1 (LOC109010256), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018985599.1	ncRNA:24   UCUUAUUAAGAUGAAUAGUAGAGA   1   ******|||||=|||||||||||| targets:1140   UUCCGUAUUCUGCUUAUCAUCUCU   1163 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109006342 (LOC109006342), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018985598.1	ncRNA:24   UCUUAUUAAGAUGAAUAGUAGAGA   1   ******|||||=|||||||||||| targets:1131   UUCCGUAUUCUGCUUAUCAUCUCU   1154 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109006342 (LOC109006342), transcript variant X1, mRNA	NA	coding protein	psRNATarget